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A Transformer-Oriented Clinical Coding Intelligence Architecture for Administrative Interoperability
The rapid evolution of artificial intelligence in healthcare necessitates robust architectures that enhance administrative interoperability through intelligent clinical coding. This conceptual manuscript proposes a novel transformer-oriented clinical coding intelligence architecture (TOCCIA) to facilitate seamless data exchange and improve coding accuracy across disparate healthcare systems. Grounded in transformer-based models, TOCCIA integrates multi-layered intelligence pipelines that process electronic health records (EHRs) to automate ICD-10 and other coding standards, ensuring compliance with interoperability frameworks such as HL7 FHIR. The architecture emphasizes governance mechanisms for data privacy, model monitoring, and workflow integration to address challenges arising from administrative silos. By theorizing a feedback topology that incorporates human oversight and continuous learning loops, TOCCIA mitigates risks such as coding drift and interoperability failures. Conceptual formulas are introduced to interpret decision confidence and governance load, highlighting trade-offs in resource allocation. This work synthesizes literature on clinical AI systems, healthcare analytics, and interoperability, offering a blueprint for deploying transformer-driven intelligence in administrative contexts. Ultimately, TOCCIA advances theoretical discourse on AI-orchestrated healthcare ecosystems, promoting equitable and efficient administrative operations without empirical validation.
Journal of Artificial Intelligence for Healthcare Systems
Original Research | Open access | 20 July 2023 | Article: 13

Transformer Models in Clinical Natural Language: A Systematic Review of Pre-Training Corpora, Fine-Tuning Strategies, and Named Entity Recognition Performance
Transformer-based architectures have significantly advanced clinical natural language processing by improving the capture of contextual relationships in unstructured electronic health records compared to earlier recurrent and convolutional models, with domain-specific variants such as ClinicalBERT and BioBERT designed to better handle clinical terminology, abbreviations, and specialized language, thereby improving information extraction performance, although the relative impact of different pre-training strategies remains insufficiently synthesized and requires systematic evaluation of corpus selection and fine-tuning approaches; this systematic review mapped studies focusing on pre-training corpora, fine-tuning methods, and named entity recognition performance across entity types such as medications, diseases, procedures, laboratory tests, and social determinants of health, using PRISMA-guided methods and searches across PubMed, ACL Anthology, arXiv, and IEEE Xplore, identifying 32 eligible studies from 1,247 records; findings showed that ClinicalBERT, BioBERT, and PubMedBERT were the most frequently evaluated models, pre-trained on datasets such as MIMIC-III, PubMed abstracts, and mixed biomedical corpora, with consistent evidence that domain-specific pre-training outperforms general-domain BERT models on benchmarks like i2b2 and n2c2 despite variation across entity types and fine-tuning strategies, while clinical pre-training on large EHR corpora improves named entity recognition and optimized fine-tuning approaches such as lower learning rates and data augmentation further enhance performance, particularly for medications and diseases, underscoring the importance of domain adaptation and the need for more standardized evaluation protocols in clinical NLP research.
Journal of Artificial Intelligence for Healthcare Systems
Review | Open access | 20 January 2024 | Article: 80

Self-Supervised Representation Learning for Healthcare Operations Events Using Timestamped Orders, Patient Transfers, Staff Actions, Queue Transitions, System Interaction Logs, and Unit-Level Workflow Signals
Hospitals generate dense streams of timestamped operational events, including orders, transfers, staff actions, queue changes, and system interactions. These events describe how care actually unfolds, yet much of their value remains unused because they are rarely labeled for prediction tasks. Existing operational predictive models often depend on task-specific labels, handcrafted features, and local workflow assumptions. This limits their ability to scale across hospitals, departments, and evolving operational conditions. This manuscript designs a self-supervised representation learning model that pre-trains on diverse healthcare operations event streams. The goal is to learn a generalizable embedding of hospital operational state that can be adapted to multiple downstream prediction tasks. The proposed model uses a transformer-based architecture trained with masked event modeling and temporal contrastive learning. Timestamped orders, transfers, staff actions, queue transitions, system interaction logs, and unit-level workflow signals are represented as time-aware event sequences, and the pre-trained backbone is later fine-tuned for specific operational tasks. Conceptually, the model could learn semantic and temporal regularities of hospital workflow, such as common discharge sequences, clustered STAT order activity, and operational precursors to bottlenecks. These representations would be expected to support downstream tasks such as delay forecasting, anomaly detection, and resource demand estimation when labeled data are limited. Self-supervised learning could unlock the latent value of healthcare operations logs by creating reusable representations of hospital workflow. Such a model could become a foundation for operational analytics, enabling faster and more adaptable development of predictive tools.
Journal of Health Informatics and Digital Systems
Original Research | Open access | 20 July 2026 | Article: 138
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AI-driven Diagnostics Artificial Intelligence in Health Informatics Artificial Intelligence in Healthcare Big Data in Healthcare Clinical Data Mining Clinical Decision Support Systems Clinical Informatics Computer Vision Connected Health Systems Deep Learning Digital Health Digital Healthcare Innovation Digital Transformation in Healthcare Electronic Health Records Ethical AI in Healthcare Explainable AI Health Data Analytics Health Data Privacy Health Informatics Health Information Management Health Information Systems Health System Optimization Health Technology Assessment Healthcare Data Science Healthcare Informatics Healthcare Information Security Healthcare Management Healthcare Management Information Systems Intelligent Medical Systems Internet of Medical Things (IoMT) Interoperability in Healthcare Systems Machine Learning Medical Data Analytics Medical Data Management Medical Imaging Mobile Health (mHealth) Natural Language Processing Precision Medicine Predictive Analytics Remote Patient Monitoring Smart Healthcare Systems Telemedicine Wearable Health Technologies e-Health




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