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Variational Autoencoder for Unsupervised Detection of Adverse Drug Reaction Signals from Electronic Health Record Clinical Notes and Laboratory Abnormalities
Adverse drug reactions (ADRs) are a major global health issue, contributing to significant morbidity, mortality, and healthcare costs. Many ADRs are detected only after widespread drug use, reflecting limitations of pre-market trials in capturing real-world patient variability. Although electronic health records (EHRs) collected between 2017 and 2023 provide rich data for post-market surveillance, they remain underused for systematic ADR detection. Current pharmacovigilance methods rely heavily on spontaneous reporting systems, which suffer from underreporting and bias, while supervised machine learning approaches require labeled ADR data that are often unavailable for rare or novel events. This paper proposes a variational autoencoder (VAE)-based unsupervised framework to detect ADR signals from multimodal EHR data, including clinical notes and laboratory results. The model learns normal patient data distributions and identifies deviations as potential safety signals without requiring labeled ADR examples. A multimodal architecture combines natural language processing of clinical notes with structured laboratory encoders, forming a shared latent space for anomaly detection based on reconstruction error. The framework enables detection of unknown ADRs by flagging abnormal patterns in patient records across large datasets from 2017 to 2023. Its unsupervised nature makes it suitable for identifying rare or previously unrecognized drug safety issues. Overall, this approach offers a scalable, proactive pharmacovigilance strategy that shifts drug safety monitoring from reactive reporting to predictive detection using routine EHR data.
Journal of Artificial Intelligence for Healthcare Systems
Original Research | Open access | 20 January 2024 | Article: 78

Causal Forest Models with Double Machine Learning for Heterogeneous Treatment Effects in Antihypertensive Therapy: A Position Paper on Personalized Prescribing from Observational EHR Data
Hypertension affects about 1.4 billion adults globally and is a major modifiable risk factor for cardiovascular disease. Although several first-line antihypertensive drug classes exist, randomized controlled trials typically report only average treatment effects (ATEs), which mask important variability in individual patient responses. As a result, clinical guidelines often assume a homogeneous patient population, leading to trial-and-error prescribing, delayed blood pressure control, and avoidable adverse effects. I argue that causal forest models combined with double machine learning (DML) enable reliable estimation of heterogeneous treatment effects (HTEs) from observational electronic health record data. These methods can approximate randomized trial validity while capturing clinically meaningful variation in treatment response across patients. Compared with traditional approaches, they are computationally feasible and better suited for individualized treatment assessment. Therefore, comparative effectiveness research in hypertension should move beyond ATE-focused analyses toward routine HTE estimation using causal machine learning. This shift would support more precise, data-driven prescribing and improve patient outcomes.
Journal of Artificial Intelligence for Healthcare Systems
Original Research | Open access | 20 January 2024 | Article: 83

Causal Evidence for Telemedicine in Diabetes Control: Why Bayesian Structural Time Series on State-Level EHR Aggregates Should Guide Policy
Telemedicine expanded rapidly in the United States during the COVID-19 public health emergency as Medicare and state Medicaid programs relaxed coverage restrictions. Diabetes affects about 37 million Americans, and key outcomes such as HbA1c, blood pressure, and LDL cholesterol are routinely tracked in electronic health records. However, the causal impact of telemedicine expansion on these outcomes remains uncertain, as simple pre–post comparisons are confounded by concurrent trends such as the pandemic and seasonal variation. Randomized policy experiments are impractical, leaving a gap in high-quality causal evidence. We argue that Bayesian structural time series (BSTS) applied to state-level EHR aggregates provides a strong alternative. BSTS constructs a synthetic counterfactual from similar states, modeling trend and seasonality to estimate what outcomes would have been without telemedicine expansion. This allows clearer separation of policy effects from underlying time dynamics and produces interpretable estimates with uncertainty bounds. Unlike difference-in-differences, BSTS does not rely on parallel trends assumptions that may be violated in this context. It offers a transparent framework for causal inference using routinely available aggregated data. Policymakers should prioritize such causal methods when evaluating whether telemedicine expansions should become permanent rather than relying on descriptive before–after analyses.
Journal of Artificial Intelligence for Healthcare Systems
Original Research | Open access | 20 July 2024 | Article: 92

Bayesian Structural Time Series on State-Level EHR Aggregates: The Optimal Method for Estimating Telemedicine's Causal Impact on Diabetes Control
Telemedicine expanded rapidly during COVID-19 as Medicare and states relaxed long-standing restrictions. Diabetes outcomes (HbA1c, blood pressure, LDL cholesterol) are routinely tracked in EHRs, yet causal evidence that telemedicine improves these outcomes remains limited. Pre-post analyses cannot separate telemedicine effects from confounding time trends such as seasonality and pandemic-related changes, while randomized state-level policy trials are infeasible. This leaves a key evidence gap for policy decisions. Bayesian structural time series (BSTS) using state-level EHR aggregates is the most suitable approach for causal inference, constructing counterfactual outcomes from similar donor states. BSTS accounts for trends, seasonality, and autocorrelation, and uses synthetic control principles to reduce confounding. It also provides uncertainty estimates and works with routinely collected aggregate data. Policymakers should require BSTS-based evidence before making telemedicine coverage permanent. Researchers should apply these methods to existing policy variation and share data and code. States should build routine EHR-based monitoring systems for diabetes outcomes. Causal evaluation of telemedicine is feasible now using existing data and methods. Relying on pre-post studies or waiting for randomized trials delays actionable evidence needed for policy decisions.
Journal of Artificial Intelligence for Healthcare Systems
Original Research | Open access | 20 July 2024 | Article: 93

Sequence Learning Model for Predicting Specialist Consultation Completion Delays Using Consultation Type, Patient Location, Specialty Workload, Ordering Service, Communication Logs, and Escalation History
Specialist consultation delays are a pervasive source of prolonged inpatient stays and disrupted throughput. They remain difficult to anticipate because delay risk emerges across ordering, communication, workload, and completion steps. A predictive model could support earlier recognition of consults likely to exceed expected completion windows. Existing consultation monitoring often depends on retrospective reports, manual tracking, or informal escalation. These approaches miss the opportunity to intervene while the consultation is still unfolding. A real-time model could convert consult workflow events into actionable delay forecasts. This article proposes a sequence learning model that predicts the probability of specialist consultation completion delay at the time of order entry. The model would refine this probability after each subsequent event, including messages, assignment, escalation, note drafting, and completion. The objective is conceptual model development rather than experimental evaluation. The proposed approach uses an LSTM-, GRU-, or Transformer-based architecture to ingest consultation milestones and static context. Inputs include consultation type, patient location, ordering service, specialty workload, communication logs, and escalation history. The output is a dynamically updated delay probability intended for consult workflow management. Conceptually, the model would identify high-risk consults early, such as a complex weekend consultation for a critically ill patient with no timely response from an overloaded service. It would be expected to support targeted escalation, workload redistribution, and proactive communication. No empirical performance claims are made. A sequence learning model could help hospitals move from passive consultation tracking to proactive delay management. By combining temporal workflow events with operational context, the model could support more timely specialist input and reduce avoidable length-of-stay pressure. Future evaluation should focus on safety, fairness, usability, and workflow impact.
Journal of Health Informatics and Digital Systems
Original Research | Open access | 25 February 2024 | Article: 87

Interpretable Machine Learning Model for Detecting Clinical Pathway Deviations in Hospitalized Patients Using Order Sequences, Vital Sign Trends, Laboratory Monitoring Frequency, and Provider Decision Patterns
Clinical pathways are designed to standardize inpatient care for common conditions while allowing clinically justified individualization. Deviations from these pathways are frequent and may reflect either appropriate adaptation to patient complexity or potentially harmful departure from evidence-informed practice. Current deviation detection often depends on retrospective audit, static compliance rules, or aggregate dashboards. These approaches can miss subtle temporal drift in care delivery and rarely explain why a specific patient trajectory diverged from the expected pathway. This article proposes an interpretable machine learning model for detecting clinical pathway deviations in hospitalized patients. The model focuses on order sequences, vital sign trends, laboratory monitoring frequency, and provider decision patterns as dynamic indicators of care-process variation. Conceptually, the model would compare each patient’s evolving care trajectory with learned expected pathways using sequence-comparison and outlier-detection logic. SHAP-based or attention-informed explanations would identify the specific features responsible for a deviation flag, such as delayed monitoring, omitted follow-up testing, or unusual ordering behavior. The proposed model could detect when a patient’s care trajectory diverges from an expected pathway and provide a transparent rationale for review. For example, it could flag a missing repeat troponin, a delayed antibiotic escalation, or a laboratory monitoring pattern inconsistent with the patient’s clinical state. An interpretable pathway-deviation model could shift quality monitoring from manual, sample-based review toward continuous and transparent pathway surveillance. Such a system would support real-time clinical awareness, structured audit, and organizational learning.
Journal of Health Informatics and Digital Systems
Original Research | Open access | 20 July 2024 | Article: 98
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AI-driven Diagnostics Artificial Intelligence in Health Informatics Artificial Intelligence in Healthcare Big Data in Healthcare Clinical Data Mining Clinical Decision Support Systems Clinical Informatics Computer Vision Connected Health Systems Deep Learning Digital Health Digital Healthcare Innovation Digital Transformation in Healthcare Electronic Health Records Ethical AI in Healthcare Explainable AI Health Data Analytics Health Data Privacy Health Informatics Health Information Management Health Information Systems Health System Optimization Health Technology Assessment Healthcare Data Science Healthcare Informatics Healthcare Information Security Healthcare Management Healthcare Management Information Systems Intelligent Medical Systems Internet of Medical Things (IoMT) Interoperability in Healthcare Systems Machine Learning Medical Data Analytics Medical Data Management Medical Imaging Mobile Health (mHealth) Natural Language Processing Precision Medicine Predictive Analytics Remote Patient Monitoring Smart Healthcare Systems Telemedicine Wearable Health Technologies e-Health




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